Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimb/mfa2 family fimbrial subunit | NQ519_12095 | B2RHG2 | Negative | 3004001 - 3004915 | 34027.6 |
| mfa1 family fimbria major subunit | NQ519_12100 | Not Available | Negative | 3004955 - 3006298 | 48507.9 |
| duf3575 domain-containing protein | NQ519_12105 | Not Available | Negative | 3006396 - 3007670 | 49502.4 |
| recombinase family protein | NQ519_12110 | P04130 | Positive | 3007987 - 3008661 | 25895.8 |
| hypothetical protein | NQ519_12115 | Not Available | Negative | 3008670 - 3009137 | 16050.9 |
| site-specific integrase | NQ519_12120 | Q9V1P5 | Positive | 3010408 - 3011652 | 47898.7 |
| rrf2 family transcriptional regulator | NQ519_12125 | Q7N223 | Positive | 3011922 - 3012404 | 18098.1 |
| duf3575 domain-containing protein | NQ519_12130 | Not Available | Positive | 3012456 - 3013787 | 49906.2 |
| duf5119 domain-containing protein | NQ519_12135 | A7LXW1 | Positive | 3013784 - 3014764 | 36076.0 |
| fimbrillin family protein | NQ519_12140 | Not Available | Positive | 3014805 - 3015983 | 42766.1 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
