Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | NQ519_12045 | P0A4I7 | Negative | 2991428 - 2992687 | 47889.7 |
| is982 family transposase | NQ519_12050 | P35163 | Negative | 2992702 - 2993230 | 19422.5 |
| hypothetical protein | NQ519_12055 | Not Available | Negative | 2993358 - 2993546 | 7697.83 |
| hypothetical protein | NQ519_12060 | Not Available | Negative | 2993558 - 2994034 | 17764.7 |
| pepsy-like domain-containing protein | NQ519_12065 | Not Available | Negative | 2994056 - 2994511 | 17152.4 |
| reverse transcriptase domain-containing protein | NQ519_12070 | Q47688 | Negative | 2994529 - 2995809 | 50853.6 |
| four helix bundle protein | NQ519_12075 | Not Available | Negative | 2998399 - 2998785 | 15222.7 |
| hypothetical protein | NQ519_12080 | Not Available | Negative | 2998754 - 2999344 | 22096.0 |
| hypothetical protein | NQ519_12085 | Not Available | Negative | 2999441 - 3002371 | 106354.0 |
| fimb/mfa2 family fimbrial subunit | NQ519_12090 | Not Available | Negative | 3002416 - 3003966 | 56658.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
