Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ519_11945 | Not Available | Positive | 2973563 - 2973991 | 16428.1 |
| relaxase/mobilization nuclease domain-containing protein | NQ519_11950 | Not Available | Positive | 2973970 - 2975217 | 46544.6 |
| ywfcy domain-containing protein | NQ519_11955 | Not Available | Positive | 2975220 - 2977229 | 76704.9 |
| hypothetical protein | NQ519_11960 | Not Available | Negative | 2977258 - 2977587 | 13233.3 |
| pddexk nuclease domain-containing protein | NQ519_11965 | P45423 | Negative | 2977590 - 2978648 | 41306.2 |
| helix-turn-helix domain-containing protein | NQ519_11970 | O27383 | Negative | 2978910 - 2979272 | 13914.7 |
| type ii toxin-antitoxin system rele/pare family toxin | NQ519_11975 | Not Available | Negative | 2979269 - 2979526 | 9707.01 |
| hypothetical protein | NQ519_11980 | Not Available | Negative | 2980199 - 2980387 | 7296.0 |
| hypothetical protein | NQ519_11985 | Not Available | Negative | 2980384 - 2980521 | 5326.28 |
| rtec domain-containing protein | NQ519_11990 | Not Available | Negative | 2980791 - 2981393 | 23733.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
