Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein traj | NQ519_11895 | Not Available | Negative | 2963103 - 2964161 | 38842.7 |
| duf4141 domain-containing protein | NQ519_11900 | Not Available | Negative | 2964196 - 2964825 | 24011.1 |
| duf3876 domain-containing protein | NQ519_11905 | Not Available | Negative | 2964848 - 2965213 | 13714.5 |
| reverse transcriptase domain-containing protein | NQ519_11910 | P0A3U0 | Negative | 2965458 - 2967281 | 70901.0 |
| is982 family transposase | NQ519_11915 | P18004 | Negative | 2967842 - 2970226 | 91536.0 |
| duf4133 domain-containing protein | NQ519_11920 | Not Available | Negative | 2970210 - 2970548 | 12829.0 |
| duf4134 domain-containing protein | NQ519_11925 | Not Available | Negative | 2970560 - 2970859 | 10258.5 |
| conjugal transfer protein trad | NQ519_11930 | Not Available | Negative | 2971004 - 2971726 | 26242.7 |
| duf3408 domain-containing protein | NQ519_11935 | Not Available | Negative | 2971730 - 2972143 | 16174.1 |
| para family protein | NQ519_11940 | Not Available | Negative | 2972148 - 2972903 | 28070.2 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
