Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | NQ519_11645 | P25894 | Negative | 2905649 - 2906455 | 28711.0 |
| acetyl-coa hydrolase/transferase family protein | NQ519_11650 | P38942 | Negative | 2906646 - 2907965 | 47397.9 |
| translation initiation factor if-2 | NQ519_11655 | A6LHS1 | Negative | 2908002 - 2910884 | 103801.0 |
| transcription termination factor nusa | NQ519_11660 | P48514 | Negative | 2910916 - 2912145 | 46359.3 |
| ribosome assembly cofactor rimp | NQ519_11665 | A6LHR9 | Negative | 2912175 - 2912642 | 17359.6 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | NQ519_11670 | Q1D387 | Negative | 2912765 - 2913559 | 28582.1 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | NQ519_11675 | Q8A015 | Negative | 2913563 - 2914954 | 51694.6 |
| energy transducer tonb | NQ519_11680 | Not Available | Positive | 2915042 - 2915845 | 29998.3 |
| zinc ribbon domain-containing protein | NQ519_11685 | Not Available | Positive | 2915909 - 2915995 | 3218.97 |
| glyoxalase | NQ519_11690 | Q49VY9 | Positive | 2916000 - 2916557 | 21316.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
