Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ519_11595 | Not Available | Positive | 2894491 - 2895444 | 35089.8 |
| mfs transporter | NQ519_11600 | Q5XBB2 | Negative | 2895493 - 2896701 | 43021.6 |
| 50s ribosomal protein l20 | NQ519_11605 | A0LYZ0 | Negative | 2896776 - 2897120 | 12722.9 |
| 50s ribosomal protein l35 | NQ519_11610 | Q8AAP0 | Negative | 2897211 - 2897405 | 7232.05 |
| mgtc/sapb family protein | NQ519_11615 | P0AFV3 | Positive | 2897613 - 2898284 | 24215.6 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | NQ519_11620 | P32167 | Negative | 2898343 - 2898972 | 22589.8 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2899552 - 2901079 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2901266 - 2904138 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2904244 - 2904357 | Not Available |
| endonuclease viii | NQ519_11640 | A9HI30 | Positive | 2904733 - 2905560 | 30037.1 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
