Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | NQ519_10645 | Q99W51 | Positive | 2679495 - 2679941 | 16100.3 |
| hypothetical protein | NQ519_10650 | Not Available | Positive | 2680039 - 2680998 | 34165.7 |
| trna epoxyqueuosine(34) reductase queg | NQ519_10655 | G0J2F8 | Negative | 2681361 - 2682296 | 33843.4 |
| amp-binding protein | NQ519_10660 | Q7TYX8 | Positive | 2682396 - 2684063 | 61625.8 |
| helix-turn-helix transcriptional regulator | NQ519_10665 | Not Available | Negative | 2684452 - 2684688 | 8872.64 |
| aspartate--ammonia ligase | NQ519_10670 | A6LI95 | Negative | 2685167 - 2686201 | 39242.4 |
| duf2723 domain-containing protein | NQ519_10675 | Q9NX78 | Negative | 2686368 - 2689595 | 122408.0 |
| is982 family transposase | NQ519_10680 | P25888 | Negative | 2690188 - 2691294 | 40539.4 |
| m15 family metallopeptidase | NQ519_10685 | P77790 | Positive | 2691476 - 2692150 | 25147.5 |
| cysteine--trna ligase | NQ519_10690 | Q5LIT7 | Positive | 2692216 - 2693691 | 55331.7 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
