Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | NQ519_10545 | Q18DN4 | Positive | 2657898 - 2659700 | 63187.4 |
| fimbrillin family protein | NQ519_10550 | Q18DN4 | Positive | 2659765 - 2661462 | 58894.4 |
| competence protein coia family protein | NQ519_10555 | Not Available | Negative | 2661585 - 2662583 | 38420.1 |
| duf2958 domain-containing protein | NQ519_10560 | Not Available | Positive | 2662848 - 2663165 | 12459.9 |
| hypothetical protein | NQ519_10565 | Not Available | Positive | 2663236 - 2663625 | 15072.2 |
| is3 family transposase | NQ519_10570 | P19769 | Negative | 2663662 - 2664411 | 29883.2 |
| helix-turn-helix domain-containing protein | NQ519_10575 | Q48585 | Negative | 2664448 - 2664960 | 19879.5 |
| helix-turn-helix domain-containing protein | NQ519_10580 | Not Available | Negative | 2665033 - 2665329 | 11478.9 |
| helix-turn-helix domain-containing protein | NQ519_10585 | Not Available | Negative | 2665331 - 2665615 | 10768.2 |
| uracil-dna glycosylase | NQ519_10590 | A6L7T5 | Negative | 2665985 - 2666647 | 24608.4 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
