Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6371 domain-containing protein | NQ519_10295 | Not Available | Positive | 2602409 - 2603428 | 38938.8 |
| plasmid recombination protein | NQ519_10300 | P03857 | Positive | 2603579 - 2605123 | 59555.3 |
| restriction endonuclease subunit s | NQ519_10305 | P10485 | Positive | 2605133 - 2606380 | 47213.1 |
| restriction endonuclease subunit s | NQ519_10310 | Q58615 | Negative | 2606375 - 2606902 | 19997.2 |
| tyrosine-type recombinase/integrase | NQ519_10315 | Q5JHA3 | Positive | 2606909 - 2607712 | 31516.3 |
| restriction endonuclease subunit s | NQ519_10320 | P19704 | Negative | 2607743 - 2609143 | 52361.1 |
| pddexk nuclease domain-containing protein | NQ519_10325 | P45423 | Negative | 2609149 - 2610306 | 44861.3 |
| duf262 domain-containing hnh endonuclease family protein | NQ519_10330 | Not Available | Negative | 2610303 - 2612120 | 70525.6 |
| type i restriction-modification system subunit m | NQ519_10335 | Q89Z59 | Negative | 2612133 - 2613548 | 53020.3 |
| dead/deah box helicase family protein | NQ519_10340 | P08956 | Negative | 2613552 - 2616257 | 102830.0 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
