Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod/siga | NQ519_10095 | P52329 | Positive | 2574939 - 2575799 | 32683.0 |
| site-specific integrase | NQ519_10100 | Q8Y5V0 | Positive | 2576101 - 2577318 | 47113.9 |
| helix-turn-helix domain-containing protein | NQ519_10105 | Not Available | Positive | 2577424 - 2577723 | 11942.7 |
| hypothetical protein | NQ519_10110 | Not Available | Positive | 2577735 - 2578064 | 13061.2 |
| hypothetical protein | NQ519_10115 | Not Available | Positive | 2578346 - 2578546 | 7636.17 |
| hypothetical protein | NQ519_10120 | Not Available | Positive | 2578543 - 2579196 | 25945.4 |
| hypothetical protein | NQ519_10125 | Not Available | Positive | 2579203 - 2579415 | 7917.34 |
| hypothetical protein | NQ519_10130 | Not Available | Positive | 2579428 - 2579727 | 11954.7 |
| hypothetical protein | NQ519_10135 | Not Available | Positive | 2579776 - 2580099 | 12082.0 |
| hypothetical protein | NQ519_10140 | Not Available | Positive | 2580105 - 2580542 | 16312.3 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
