Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | NQ519_09795 | Q6MPX9 | Negative | 2495888 - 2497147 | 46395.9 |
| abc transporter permease | NQ519_09800 | Q5F6V6 | Negative | 2497323 - 2498582 | 46579.0 |
| abc transporter atp-binding protein | NQ519_09805 | O31711 | Negative | 2498579 - 2499268 | 25281.6 |
| had family hydrolase | NQ519_09810 | Q9I767 | Negative | 2499408 - 2500082 | 24542.1 |
| acetyl-coa hydrolase/transferase family protein | NQ519_09815 | P38942 | Negative | 2500124 - 2501419 | 46295.7 |
| pyridoxal phosphate-dependent aminotransferase | NQ519_09820 | P77434 | Negative | 2501428 - 2502738 | 48455.2 |
| indolepyruvate oxidoreductase subunit beta | NQ519_09825 | P80911 | Negative | 2502735 - 2503322 | 20711.2 |
| thiamine pyrophosphate-dependent enzyme | NQ519_09830 | O28783 | Negative | 2503329 - 2504927 | 57459.9 |
| sigma-70 family rna polymerase sigma factor | NQ519_09835 | H8EXN1 | Positive | 2505179 - 2505802 | 23838.6 |
| lrp/asnc family transcriptional regulator | NQ519_09840 | P0ACJ7 | Negative | 2505830 - 2506300 | 17999.9 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
