Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is982 family transposase | NQ519_09695 | Not Available | Negative | 2471963 - 2473032 | 39212.7 |
| helix-turn-helix domain-containing protein | NQ519_09700 | Not Available | Negative | 2473035 - 2473394 | 14163.8 |
| hypothetical protein | NQ519_09705 | Not Available | Negative | 2473492 - 2474265 | 29626.6 |
| site-specific integrase | NQ519_09710 | Q2LT92 | Negative | 2474432 - 2475547 | 43782.0 |
| helix-turn-helix domain-containing protein | NQ519_09715 | Not Available | Negative | 2475665 - 2476543 | 35045.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | NQ519_09720 | Q89Z26 | Negative | 2476816 - 2478171 | 48657.1 |
| transglycosylase slt domain-containing protein | NQ519_09725 | P0AEZ8 | Negative | 2478176 - 2479555 | 52109.4 |
| duf5683 domain-containing protein | NQ519_09730 | Not Available | Negative | 2479559 - 2480728 | 44104.1 |
| parb/repb/spo0j family partition protein | NQ519_09735 | P0A151 | Negative | 2480737 - 2481606 | 32202.7 |
| aaa family atpase | NQ519_09740 | Q9K5N0 | Negative | 2481617 - 2482387 | 28187.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
