Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5119 domain-containing protein | NQ519_09595 | A7LXW1 | Negative | 2447384 - 2448334 | 34608.6 |
| duf3575 domain-containing protein | NQ519_09600 | Not Available | Negative | 2448331 - 2449677 | 50502.0 |
| hypothetical protein | NQ519_09605 | Not Available | Negative | 2449848 - 2450501 | 25656.1 |
| hypothetical protein | NQ519_09610 | Not Available | Negative | 2450608 - 2451513 | 34696.8 |
| helix-turn-helix domain-containing protein | NQ519_09615 | Not Available | Positive | 2452956 - 2453276 | 11850.9 |
| atp-binding protein | NQ519_09620 | Q60260 | Positive | 2453396 - 2454769 | 52567.6 |
| type i restriction-modification system subunit m | NQ519_09625 | Q57596 | Positive | 2454806 - 2456299 | 56306.3 |
| type i restriction-modification system subunit m | NQ519_09630 | Q58617 | Positive | 2456305 - 2457837 | 57708.0 |
| restriction endonuclease subunit s | NQ519_09635 | P06991 | Positive | 2457839 - 2458960 | 42493.9 |
| tyrosine-type recombinase/integrase | NQ519_09640 | Q7ZAM5 | Positive | 2459018 - 2460001 | 37735.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
