Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 2417291 - 2417365 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2417453 - 2417527 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2417567 - 2417641 | Not Available |
| bile acid:sodium symporter family protein | NQ519_09460 | Q93YR2 | Positive | 2417685 - 2418584 | 31584.1 |
| tonb-dependent receptor | NQ519_09465 | Not Available | Positive | 2418629 - 2420989 | 87287.5 |
| duf4988 domain-containing protein | NQ519_09470 | Not Available | Positive | 2421792 - 2423435 | 58015.6 |
| adenylosuccinate lyase | NQ519_09475 | Q54J34 | Negative | 2423505 - 2424851 | 50333.4 |
| duf4834 family protein | NQ519_09480 | Not Available | Positive | 2424955 - 2425371 | 15743.3 |
| abc transporter permease | NQ519_09485 | Q1RGU3 | Positive | 2425376 - 2426119 | 26806.9 |
| atp-binding cassette domain-containing protein | NQ519_09490 | Q3A9G5 | Positive | 2426116 - 2426871 | 28388.2 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
