Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| right-handed parallel beta-helix repeat-containing protein | NQ519_08295 | B2UNU8 | Negative | 2125746 - 2127605 | 68936.4 |
| hypothetical protein | NQ519_08300 | Q89ZX0 | Negative | 2127616 - 2129457 | 68215.2 |
| helix-turn-helix domain-containing protein | NQ519_08305 | T2KMF4 | Positive | 2129660 - 2133613 | 148612.0 |
| tolc family protein | NQ519_08310 | Q8G0Y6 | Positive | 2133722 - 2135020 | 47550.2 |
| efflux rnd transporter periplasmic adaptor subunit | NQ519_08315 | P58411 | Positive | 2135040 - 2136224 | 42367.1 |
| abc transporter atp-binding protein | NQ519_08320 | Q9WYI7 | Positive | 2136227 - 2136967 | 27262.7 |
| abc transporter permease | NQ519_08325 | A0LM36 | Positive | 2136971 - 2138191 | 44186.8 |
| histidine kinase | NQ519_08330 | Q8EQQ2 | Positive | 2138216 - 2139265 | 39833.4 |
| lyttr family dna-binding domain-containing protein | NQ519_08335 | Q9KL96 | Positive | 2139262 - 2139981 | 27562.5 |
| rna polymerase sigma-70 factor | NQ519_08340 | Q06198 | Positive | 2140089 - 2140607 | 20308.7 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
