Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4843 domain-containing protein | NQ519_07745 | Not Available | Negative | 1985809 - 1986714 | 34621.7 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_07750 | T2KPM5 | Negative | 1986728 - 1988194 | 55104.7 |
| susc/raga family tonb-linked outer membrane protein | NQ519_07755 | T2KMI3 | Negative | 1988208 - 1991531 | 124081.0 |
| zinc-dependent metalloprotease | NQ519_07760 | Not Available | Negative | 1991584 - 1994256 | 100118.0 |
| endonuclease/exonuclease/phosphatase family protein | NQ519_07765 | Not Available | Positive | 1994637 - 1995686 | 39246.4 |
| atp-binding protein | NQ519_07770 | Q54YZ9 | Positive | 1995879 - 1997828 | 72867.6 |
| hypothetical protein | NQ519_07775 | Not Available | Negative | 1997949 - 1998449 | 17463.5 |
| hypothetical protein | NQ519_07780 | Not Available | Negative | 1998497 - 1998862 | 12937.8 |
| Trna-thr | Not Available | Not Available | Positive | 1999451 - 1999525 | Not Available |
| carbon starvation protein a | NQ519_07790 | O86233 | Positive | 1999654 - 2001126 | 53236.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
