Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| port family protein | NQ519_07395 | Not Available | Positive | 1896751 - 1897560 | 31081.8 |
| 30s ribosome-binding factor rbfa | NQ519_07400 | A0M6N1 | Positive | 1897573 - 1897914 | 13188.8 |
| abc transporter permease | NQ519_07405 | P44250 | Positive | 1897922 - 1899127 | 43166.6 |
| duf4296 domain-containing protein | NQ519_07410 | Not Available | Positive | 1899129 - 1899956 | 31728.9 |
| cytosine deaminase | NQ519_07415 | Not Available | Positive | 1899916 - 1900269 | 12609.2 |
| site-specific tyrosine recombinase xerd | NQ519_07420 | Q71Y59 | Negative | 1900278 - 1901174 | 34581.9 |
| 50s ribosomal protein l11 methyltransferase | NQ519_07425 | P60093 | Positive | 1901245 - 1902075 | 29529.1 |
| dna repair protein reco | NQ519_07430 | Q8A275 | Positive | 1902072 - 1902797 | 27444.2 |
| hypothetical protein | NQ519_07435 | Not Available | Positive | 1902833 - 1903207 | 13792.7 |
| opro/oprp family phosphate-selective porin | NQ519_07440 | Not Available | Positive | 1903328 - 1904383 | 39597.3 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
