Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-n-acetylhexosaminidase | NQ519_07295 | P49008 | Positive | 1874952 - 1876553 | 60344.4 |
| pkd domain-containing protein | NQ519_07300 | Not Available | Positive | 1876587 - 1877975 | 50765.4 |
| glycoside hydrolase family 18 protein | NQ519_07305 | E9ERT9 | Positive | 1877986 - 1879035 | 37710.4 |
| duf5009 domain-containing protein | NQ519_07310 | Q3UDW8 | Positive | 1879048 - 1880226 | 43465.0 |
| structural protein p5 | NQ519_07315 | Q9XJR2 | Negative | 1880276 - 1880677 | 14931.7 |
| phage holin family protein | NQ519_07320 | Not Available | Negative | 1880670 - 1881095 | 15631.1 |
| hypothetical protein | NQ519_07325 | Not Available | Negative | 1881070 - 1881543 | 17226.5 |
| phage portal protein | NQ519_07330 | P51717 | Negative | 1881540 - 1882766 | 46244.5 |
| hypothetical protein | NQ519_07335 | Not Available | Negative | 1882839 - 1883816 | 36662.2 |
| clp protease clpp | NQ519_07340 | Q5NNY8 | Negative | 1883913 - 1884782 | 31337.5 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
