Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | NQ519_07245 | P58258 | Negative | 1860783 - 1861835 | 40285.1 |
| 6-phosphogluconolactonase | NQ519_07250 | B1YJ30 | Negative | 1861880 - 1862656 | 28587.3 |
| mfs transporter | NQ519_07255 | Q2YIJ8 | Positive | 1862931 - 1864274 | 48300.4 |
| n-acetylglucosamine-6-phosphate deacetylase | NQ519_07260 | Q84F86 | Positive | 1864279 - 1865448 | 42192.1 |
| family 20 glycosylhydrolase | NQ519_07265 | Not Available | Positive | 1865655 - 1866662 | 38427.3 |
| susc/raga family tonb-linked outer membrane protein | NQ519_07270 | T2KPJ3 | Positive | 1866697 - 1869909 | 117670.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | NQ519_07275 | Not Available | Positive | 1869924 - 1871792 | 69066.2 |
| hypothetical protein | NQ519_07280 | Not Available | Positive | 1871820 - 1872170 | 12802.4 |
| heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein | NQ519_07285 | Q68CP4 | Positive | 1872235 - 1873383 | 42368.6 |
| family 20 glycosylhydrolase | NQ519_07290 | A6QNR0 | Positive | 1873394 - 1874950 | 59147.8 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
