Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | NQ519_07045 | P14375 | Positive | 1792953 - 1794308 | 48779.5 |
| hypothetical protein | NQ519_07050 | Not Available | Positive | 1794536 - 1794745 | 7609.18 |
| sialyltransferase | NQ519_07055 | Not Available | Negative | 1794925 - 1796439 | 56250.6 |
| gnat family n-acetyltransferase | NQ519_07060 | Not Available | Negative | 1796591 - 1797598 | 39269.2 |
| acyltransferase | NQ519_07065 | Not Available | Negative | 1797627 - 1798454 | 32252.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | NQ519_07070 | A6LEV0 | Positive | 1798548 - 1799468 | 33945.7 |
| ftsl-like putative cell division protein | NQ519_07075 | Not Available | Positive | 1799615 - 1800130 | 20838.6 |
| penicillin-binding transpeptidase domain-containing protein | NQ519_07080 | G3XD46 | Positive | 1800137 - 1802395 | 84867.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | NQ519_07085 | A6L075 | Positive | 1802397 - 1803851 | 52619.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | NQ519_07090 | A6H198 | Positive | 1803965 - 1805209 | 45557.0 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
