Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | NQ519_06845 | Q64ZS4 | Positive | 1727139 - 1728914 | 65512.7 |
| tonb-dependent receptor | NQ519_06850 | T2KPJ3 | Positive | 1728949 - 1732098 | 117006.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_06855 | T2KN63 | Positive | 1732118 - 1733743 | 61225.9 |
| duf5017 domain-containing protein | NQ519_06860 | Not Available | Positive | 1733765 - 1734763 | 36995.8 |
| duf5017 domain-containing protein | NQ519_06865 | Not Available | Positive | 1734776 - 1736713 | 70537.1 |
| glycoside hydrolase | NQ519_06870 | Not Available | Positive | 1736737 - 1738329 | 58052.6 |
| glycoside hydrolase | NQ519_06875 | Not Available | Positive | 1738335 - 1739945 | 60681.8 |
| sialate o-acetylesterase | NQ519_06880 | P82450 | Positive | 1739961 - 1741835 | 68652.3 |
| vcbs repeat-containing protein | NQ519_06885 | Not Available | Positive | 1741845 - 1743857 | 74119.5 |
| signal peptide peptidase sppa | NQ519_06890 | P73689 | Negative | 1743926 - 1745692 | 63864.9 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
