Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | NQ519_06595 | Not Available | Positive | 1656453 - 1656950 | 18941.6 |
| site-specific integrase | NQ519_06600 | Q980D9 | Negative | 1657247 - 1658476 | 47115.0 |
| rna polymerase sigma-70 factor | NQ519_06605 | Q06909 | Negative | 1658774 - 1659325 | 21297.6 |
| bacon domain-containing protein | NQ519_06610 | Not Available | Positive | 1659513 - 1659860 | 12042.2 |
| fecr domain-containing protein | NQ519_06615 | P23485 | Positive | 1659889 - 1660866 | 37565.1 |
| tonb-dependent receptor | NQ519_06620 | T2KPJ3 | Positive | 1660968 - 1664387 | 126136.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_06625 | T2KN63 | Positive | 1664406 - 1665794 | 52446.8 |
| fibronectin type iii domain-containing protein | NQ519_06630 | Q99715 | Positive | 1665819 - 1667840 | 72144.8 |
| sugar phosphate isomerase/epimerase | NQ519_06635 | Q58707 | Positive | 1667850 - 1668746 | 33734.7 |
| duf6528 family protein | NQ519_06640 | Not Available | Positive | 1668739 - 1670427 | 60536.2 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
