Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein | NQ519_06545 | O34966 | Positive | 1644209 - 1645027 | 30473.1 |
| abc transporter atp-binding protein | NQ519_06550 | Q9WXX8 | Positive | 1645024 - 1645803 | 28779.6 |
| duf4906 domain-containing protein | NQ519_06555 | Not Available | Negative | 1645867 - 1648656 | 103363.0 |
| fimbrillin family protein | NQ519_06560 | Not Available | Negative | 1648662 - 1649687 | 37300.5 |
| fimbrillin family protein | NQ519_06565 | A6L3B5 | Negative | 1649803 - 1650885 | 38923.6 |
| duf5119 domain-containing protein | NQ519_06570 | Not Available | Negative | 1650930 - 1651919 | 36312.0 |
| duf3575 domain-containing protein | NQ519_06575 | Not Available | Negative | 1651916 - 1653010 | 41609.7 |
| site-specific integrase | NQ519_06580 | Q8TZV9 | Negative | 1654282 - 1655487 | 45990.8 |
| hypothetical protein | NQ519_06585 | Not Available | Negative | 1655588 - 1655785 | 7658.29 |
| hypothetical protein | NQ519_06590 | Not Available | Negative | 1655782 - 1655997 | 8632.31 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
