Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacyl-trna deacylase | NQ519_06045 | Q8A2P0 | Negative | 1529519 - 1529971 | 16344.7 |
| rna pseudouridine synthase | NQ519_06050 | P54604 | Negative | 1529984 - 1530670 | 25404.5 |
| cytidine deaminase | NQ519_06055 | P56389 | Negative | 1530679 - 1531134 | 16795.0 |
| simpl domain-containing protein | NQ519_06060 | Not Available | Negative | 1531501 - 1532190 | 25321.4 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | NQ519_06065 | Q8AA22 | Negative | 1532259 - 1533668 | 52823.4 |
| hypothetical protein | NQ519_06070 | Not Available | Negative | 1533780 - 1534928 | 42365.8 |
| alpha/beta hydrolase | NQ519_06075 | A0A0G3FWY4 | Negative | 1534939 - 1535781 | 30927.1 |
| mbl fold metallo-hydrolase | NQ519_06080 | P75849 | Positive | 1535873 - 1536544 | 24689.1 |
| fkbm family methyltransferase | NQ519_06085 | Q9YDA1 | Positive | 1536541 - 1537272 | 27215.1 |
| trna (guanosine(37)-n1)-methyltransferase trmd | NQ519_06090 | B2RMA5 | Positive | 1537306 - 1537983 | 25607.5 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
