Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dam family site-specific dna-(adenine-n6)-methyltransferase | NQ519_05345 | Q58015 | Negative | 1368099 - 1369985 | 72929.9 |
| hipa domain-containing protein | NQ519_05350 | Q8EIX3 | Negative | 1370080 - 1371339 | 47994.4 |
| helix-turn-helix domain-containing protein | NQ519_05355 | Not Available | Negative | 1371343 - 1371648 | 11349.0 |
| response regulator | NQ519_05360 | T2KMF4 | Negative | 1372437 - 1376414 | 150594.0 |
| hypothetical protein | NQ519_05365 | Not Available | Positive | 1376701 - 1378713 | 75818.4 |
| glycoside hydrolase family 2 | NQ519_05370 | Q75W54 | Positive | 1378725 - 1381451 | 103851.0 |
| fad-dependent oxidoreductase | NQ519_05375 | Not Available | Positive | 1381448 - 1383310 | 68970.4 |
| family 43 glycosylhydrolase | NQ519_05380 | Q82P90 | Positive | 1383324 - 1384724 | 51641.7 |
| glycoside hydrolase family 88 protein | NQ519_05385 | O34559 | Positive | 1384773 - 1385972 | 46386.8 |
| glycoside hydrolase family 88 protein | NQ519_05390 | O34559 | Positive | 1385986 - 1387293 | 49467.7 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
