Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase small subunit | NCTC13639_01461 | Not Available | Positive | 1373185 - 1373691 | 18949.6 |
| Putative large terminase subunit | NCTC13639_01462 | Not Available | Positive | 1373762 - 1375813 | 77208.1 |
| Hypothetical protein | NCTC13639_01463 | Not Available | Positive | 1375810 - 1376025 | 8242.86 |
| Portal protein | NCTC13639_01464 | Not Available | Positive | 1376034 - 1377545 | 56167.6 |
| Head maturation protease | NCTC13639_01465 | Not Available | Positive | 1377502 - 1379592 | 74500.6 |
| Hypothetical protein | NCTC13639_01466 | Not Available | Positive | 1379665 - 1380000 | 11051.9 |
| Head-tail connector fii | NCTC13639_01467 | Not Available | Positive | 1380000 - 1380356 | 12762.0 |
| Putative minor tail protein z | NCTC13639_01468 | Not Available | Positive | 1380358 - 1381014 | 25520.8 |
| uncharacterised protein | NCTC13639_01469 | Not Available | Positive | 1381026 - 1381580 | 20275.5 |
| Baseplate assembly protein | NCTC13639_01470 | Not Available | Positive | 1381573 - 1382190 | 22172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

