Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysis determining protein lydb | NCTC13639_00001 | Not Available | Negative | 156 - 605 | 16872.5 |
| Lysis determining protein lyda | NCTC13639_00002 | Not Available | Negative | 605 - 919 | 11342.0 |
| Recombinase family protein | NCTC13639_00003 | Not Available | Negative | 1020 - 1364 | 12997.6 |
| Dna invertase | NCTC13639_00004 | Not Available | Negative | 1525 - 1659 | 5066.12 |
| Putative tail assembly chaperone | NCTC13639_00005 | Not Available | Positive | 3460 - 3795 | 12511.6 |
| Tail fiber protein | NCTC13639_00006 | Not Available | Positive | 3808 - 4824 | 36957.6 |
| Tail fiber assembly protein | NCTC13639_00007 | Not Available | Positive | 4836 - 5324 | 18322.6 |
| Tail fibers protein | NCTC13639_00008 | Not Available | Positive | 5341 - 5619 | 10387.8 |
| Tail fiber assembly protein | NCTC13639_00009 | Not Available | Positive | 6351 - 6575 | 8648.12 |
| Tail fiber assembly protein | NCTC13639_00010 | Not Available | Positive | 6619 - 6882 | 9945.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

