Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative excisionase | NCTC13639_01441 | Not Available | Negative | 1357178 - 1357384 | 7745.3 |
| uncharacterised protein | NCTC13639_01442 | Not Available | Negative | 1357448 - 1357999 | 20262.8 |
| Repressor protein c2 | NCTC13639_01443 | Not Available | Negative | 1358868 - 1359494 | 22797.5 |
| Prophage anti-repressor | NCTC13639_01444 | Not Available | Positive | 1359596 - 1359841 | 9142.76 |
| Hypothetical protein | NCTC13639_01445 | Not Available | Positive | 1359834 - 1360385 | 20210.8 |
| Putative transcriptional activator | NCTC13639_01446 | Not Available | Positive | 1360727 - 1361584 | 31433.9 |
| Putative dna methyltransferase | NCTC13639_01447 | Not Available | Positive | 1361581 - 1362462 | 32823.0 |
| Putative methylase | NCTC13639_01448 | Not Available | Positive | 1362455 - 1364461 | 72437.7 |
| Holiday-junction resolvase | NCTC13639_01449 | Not Available | Positive | 1364458 - 1364844 | 14265.2 |
| Phage antirepressor protein | NCTC13639_01450 | Not Available | Positive | 1364858 - 1365541 | 25332.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

