Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dara | NCTC13639_00033 | Not Available | Negative | 22085 - 22906 | 29735.7 |
| Hdf | NCTC13639_00034 | Not Available | Negative | 22899 - 23186 | 10417.6 |
| Lysis determining protein lydb | NCTC13639_00035 | Not Available | Negative | 23173 - 23937 | 28250.5 |
| Recombinase family protein | NCTC13639_00036 | Not Available | Negative | 24038 - 24484 | 16791.2 |
| Dna invertase | NCTC13639_00037 | Not Available | Negative | 24466 - 24681 | 8269.96 |
| Putative tail assembly chaperone | NCTC13639_00038 | Not Available | Positive | 25362 - 25580 | 8038.4 |
| uncharacterised protein | NCTC13639_00039 | Not Available | Positive | 26439 - 26627 | 6847.95 |
| Tail fiber assembly protein | NCTC13639_00040 | Not Available | Positive | 26741 - 27076 | 12604.3 |
| Tail fiber | NCTC13639_00041 | Not Available | Positive | 27335 - 27616 | 10485.2 |
| Deoxyuridine triphosphate nucleotidohydrolase | NCTC13639_00125 | Not Available | Positive | 103981 - 104817 | 31725.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

