Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kpsf/gutq family sugar-phosphate isomerase | EAI98_04870 | Not Available | Positive | 1172005 - 1172970 | 34406.0 |
| gtp cyclohydrolase | EAI98_04875 | Not Available | Positive | 1172974 - 1173258 | 10533.8 |
| glycoside hydrolase family 97 protein | EAI98_04880 | Not Available | Positive | 1173286 - 1175283 | 74098.8 |
| pas sensor protein | EAI98_04885 | Not Available | Negative | 1175321 - 1175665 | 12811.4 |
| cbs domain-containing protein | EAI98_04890 | Not Available | Negative | 1175745 - 1177526 | 65771.4 |
| tryptophan--trna ligase | EAI98_04895 | Not Available | Negative | 1177557 - 1178681 | 42419.8 |
| hydrogen peroxide-inducible genes activator | EAI98_04900 | Not Available | Positive | 1178994 - 1179893 | 33287.5 |
| ribosome silencing factor | EAI98_04905 | Not Available | Positive | 1180361 - 1180711 | 13129.6 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | EAI98_04910 | Not Available | Positive | 1180751 - 1182829 | 75456.1 |
| phosphatidate cytidylyltransferase | EAI98_04915 | Not Available | Positive | 1182859 - 1183707 | 30429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
