Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trar/dksa family transcriptional regulator | EAI98_04820 | Not Available | Negative | 1155750 - 1156130 | 14413.3 |
| isoleucine--trna ligase | EAI98_04825 | Not Available | Negative | 1156305 - 1159706 | 128079.0 |
| pas domain-containing sensor histidine kinase | EAI98_04830 | Not Available | Negative | 1159867 - 1162134 | 85929.2 |
| sugar o-acetyltransferase | EAI98_04835 | Not Available | Negative | 1162148 - 1162705 | 20016.1 |
| abc transporter atp-binding protein | EAI98_04840 | Not Available | Negative | 1162724 - 1164553 | 67986.7 |
| ribonuclease hi | EAI98_04845 | Not Available | Negative | 1164694 - 1165158 | 17198.3 |
| valine--trna ligase | EAI98_04850 | Not Available | Negative | 1165165 - 1167792 | 99911.4 |
| endopeptidase la | EAI98_04855 | Not Available | Positive | 1167910 - 1170339 | 90017.9 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | EAI98_04860 | Not Available | Positive | 1170419 - 1171174 | 27980.3 |
| 3-deoxy-8-phosphooctulonate synthase | EAI98_04865 | Not Available | Positive | 1171253 - 1172005 | 27290.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
