Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EAI98_04510 | Not Available | Negative | 1081101 - 1083044 | 69877.5 |
| dna2/cas4 domain-containing protein | EAI98_04515 | Not Available | Negative | 1083046 - 1086189 | 118192.0 |
| duf2807 domain-containing protein | EAI98_04520 | Not Available | Positive | 1086296 - 1087003 | 25484.4 |
| pd-(d/e)xk nuclease family protein | EAI98_04525 | Not Available | Positive | 1087222 - 1090104 | 109299.0 |
| had family phosphatase | EAI98_04530 | Not Available | Negative | 1090111 - 1090758 | 24393.0 |
| m23 family metallopeptidase | EAI98_04535 | Not Available | Negative | 1090821 - 1091771 | 36880.8 |
| m23 family metallopeptidase | EAI98_04540 | Not Available | Negative | 1091775 - 1092773 | 38119.4 |
| alanine--trna ligase | EAI98_04545 | Not Available | Positive | 1092873 - 1095494 | 97461.3 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | EAI98_04550 | Not Available | Positive | 1095752 - 1097278 | 55881.8 |
| hypothetical protein | EAI98_04555 | Not Available | Negative | 1097390 - 1097842 | 17412.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
