Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate/nitrite transporter family protein | EAI98_04205 | Not Available | Negative | 1018814 - 1019593 | 27504.3 |
| dna gyrase subunit a | EAI98_04210 | Not Available | Positive | 1019944 - 1022499 | 95110.3 |
| tetratricopeptide repeat protein | EAI98_04215 | Not Available | Positive | 1022538 - 1023884 | 49703.7 |
| mate family efflux transporter | EAI98_04225 | Not Available | Negative | 1024790 - 1026115 | 48724.5 |
| rrna pseudouridine synthase | EAI98_04230 | Not Available | Positive | 1026293 - 1027594 | 49694.7 |
| clostripain family protease | EAI98_04235 | Not Available | Negative | 1027632 - 1029122 | 54026.7 |
| duf4919 domain-containing protein | EAI98_04240 | Not Available | Negative | 1029083 - 1029820 | 28396.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EAI98_04245 | Not Available | Negative | 1029860 - 1030750 | 32582.5 |
| nad-dependent dna ligase liga | EAI98_04250 | Not Available | Negative | 1031214 - 1033241 | 75663.2 |
| hypothetical protein | EAI98_04255 | Not Available | Positive | 1033381 - 1033713 | 12460.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
