Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama/rhat family transporter | EAI98_04155 | Not Available | Positive | 1002819 - 1003730 | 32658.4 |
| tonb-dependent receptor | EAI98_04160 | Not Available | Negative | 1003826 - 1006198 | 89156.2 |
| merr family transcriptional regulator | EAI98_04165 | Not Available | Negative | 1006377 - 1007264 | 34202.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EAI98_04170 | Not Available | Positive | 1007444 - 1008247 | 30173.2 |
| type iia dna topoisomerase subunit b | EAI98_04175 | Not Available | Positive | 1008251 - 1010125 | 70312.5 |
| dna gyrase/topoisomerase iv subunit a | EAI98_04180 | Not Available | Positive | 1010132 - 1013278 | 115568.0 |
| shikimate kinase | EAI98_04185 | Not Available | Positive | 1013288 - 1013812 | 19707.6 |
| glutamate racemase | EAI98_04190 | Not Available | Positive | 1013873 - 1014646 | 27794.4 |
| dna translocase ftsk | EAI98_04195 | Not Available | Positive | 1014738 - 1017704 | 106242.0 |
| hypothetical protein | EAI98_04200 | Not Available | Positive | 1018190 - 1018684 | 18004.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
