Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | EAI98_04100 | Not Available | Negative | 989513 - 991978 | 90889.0 |
| trpb-like pyridoxal phosphate-dependent enzyme | EAI98_04105 | Not Available | Positive | 992502 - 993863 | 49309.2 |
| eama family transporter | EAI98_04110 | Not Available | Negative | 994010 - 994909 | 33334.7 |
| diaminopimelate decarboxylase | EAI98_04115 | Not Available | Negative | 994982 - 996142 | 43192.6 |
| 4-hydroxybenzoate octaprenyltransferase | EAI98_04120 | Not Available | Negative | 996192 - 997064 | 31083.6 |
| elongation factor 4 | EAI98_04125 | Not Available | Positive | 997278 - 999068 | 66733.6 |
| long-chain fatty acid--coa ligase | EAI98_04130 | Not Available | Positive | 999080 - 1000987 | 70639.3 |
| Trna-gly | Not Available | Not Available | Positive | 1001054 - 1001125 | Not Available |
| hypothetical protein | EAI98_04140 | Not Available | Negative | 1001240 - 1001524 | 11061.4 |
| lema family protein | EAI98_04150 | Not Available | Positive | 1002238 - 1002813 | 21508.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
