Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | EAI98_03950 | Not Available | Negative | 953066 - 954058 | 37193.2 |
| thioredoxin | EAI98_03955 | Not Available | Negative | 954060 - 954374 | 11453.9 |
| dna polymerase iii subunit alpha | EAI98_03960 | Not Available | Negative | 954398 - 958054 | 137928.0 |
| duf2007 domain-containing protein | EAI98_03965 | Not Available | Positive | 958179 - 958388 | 7836.52 |
| energy transducer tonb | EAI98_03970 | Not Available | Negative | 958512 - 959051 | 20122.2 |
| shikimate dehydrogenase | EAI98_03975 | Not Available | Negative | 959178 - 959915 | 26673.8 |
| duf368 domain-containing protein | EAI98_03980 | Not Available | Negative | 959919 - 960860 | 34242.0 |
| duf3276 family protein | EAI98_03985 | Not Available | Negative | 961052 - 961369 | 12373.5 |
| pdz domain-containing protein | EAI98_03990 | Not Available | Negative | 961455 - 963032 | 57611.2 |
| histidine--trna ligase | EAI98_03995 | Not Available | Negative | 963134 - 964489 | 50371.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
