Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | EAI98_03600 | Not Available | Negative | 858615 - 859238 | 23519.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | EAI98_03605 | Not Available | Negative | 859316 - 861277 | 73021.5 |
| atp-binding cassette domain-containing protein | EAI98_03610 | Not Available | Negative | 861349 - 862086 | 27532.5 |
| response regulator | EAI98_03615 | Not Available | Positive | 862341 - 865529 | 121319.0 |
| Tmrna,resume consensus sequence (at 88): tacaaatggcaataacag | Not Available | Not Available | Positive | 865956 - 866356 | Not Available |
| integrase | EAI98_03625 | Not Available | Negative | 866409 - 867716 | 50233.0 |
| hypothetical protein | EAI98_03630 | Not Available | Negative | 867749 - 868201 | 17512.9 |
| hypothetical protein | EAI98_03635 | Not Available | Negative | 868203 - 869213 | 37950.1 |
| hypothetical protein | EAI98_03640 | Not Available | Positive | 869472 - 869672 | 7786.77 |
| lruc domain-containing protein | EAI98_03645 | Not Available | Negative | 869758 - 871734 | 72432.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
