Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EAI98_03550 | Not Available | Negative | 846920 - 848521 | 59618.6 |
| susc/raga family tonb-linked outer membrane protein | EAI98_03555 | Not Available | Negative | 848543 - 851301 | 103893.0 |
| Trna-asp | Not Available | Not Available | Positive | 851304 - 851377 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 851429 - 851505 | Not Available |
| methyltransferase domain-containing protein | EAI98_03570 | Not Available | Negative | 851834 - 852370 | 20279.2 |
| hypothetical protein | EAI98_03575 | Not Available | Negative | 852361 - 852972 | 21983.5 |
| hypothetical protein | EAI98_03580 | Not Available | Negative | 852950 - 853582 | 24025.0 |
| duf2075 domain-containing protein | EAI98_03585 | Not Available | Positive | 853637 - 855052 | 53787.0 |
| uracil-dna glycosylase family protein | EAI98_03590 | Not Available | Positive | 855045 - 855620 | 21846.4 |
| dna mismatch repair protein muts | EAI98_03595 | Not Available | Positive | 855731 - 858409 | 100246.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
