Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | EAI98_03500 | Not Available | Positive | 833898 - 835937 | 72960.9 |
| rhomboid family intramembrane serine protease | EAI98_03505 | Not Available | Positive | 836133 - 836741 | 22967.1 |
| endonuclease | EAI98_03510 | Not Available | Positive | 836746 - 837897 | 43289.0 |
| yhch/yjgk/yial family protein | EAI98_03515 | Not Available | Positive | 837910 - 838359 | 16953.4 |
| udp-glucose/gdp-mannose dehydrogenase family protein | EAI98_03520 | Not Available | Negative | 838472 - 839785 | 48320.4 |
| fpra family a-type flavoprotein | EAI98_03525 | Not Available | Negative | 839812 - 840999 | 44126.9 |
| hypothetical protein | EAI98_03530 | Not Available | Negative | 841251 - 841718 | 17002.0 |
| peptidase s8 | EAI98_03535 | Not Available | Negative | 841737 - 843785 | 71629.5 |
| duf4302 domain-containing protein | EAI98_03540 | Not Available | Negative | 844187 - 845986 | 65012.4 |
| hypothetical protein | EAI98_03545 | Not Available | Negative | 845999 - 846889 | 33740.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
