Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein lptd | EAI98_03450 | Not Available | Negative | 819919 - 822783 | 107770.0 |
| n-acetylmuramoyl-l-alanine amidase | EAI98_03455 | Not Available | Positive | 822924 - 824213 | 46657.5 |
| mce family protein | EAI98_03460 | Not Available | Positive | 824227 - 825228 | 36788.0 |
| endonuclease muts2 | EAI98_03465 | Not Available | Positive | 825250 - 827739 | 92447.9 |
| alanine racemase | EAI98_03470 | Not Available | Positive | 827822 - 830200 | 86807.4 |
| hypothetical protein | EAI98_03475 | Not Available | Positive | 830205 - 830714 | 17845.6 |
| sam-dependent methyltransferase | EAI98_03480 | Not Available | Positive | 830693 - 831403 | 26006.7 |
| nucleotide exchange factor grpe | EAI98_03485 | Not Available | Positive | 831470 - 832069 | 21797.5 |
| molecular chaperone dnaj | EAI98_03490 | Not Available | Positive | 832074 - 833240 | 41301.1 |
| hypothetical protein | EAI98_03495 | Not Available | Positive | 833448 - 833897 | 17237.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
