Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | EAI98_03300 | Not Available | Positive | 778668 - 780143 | 55597.9 |
| mate family efflux transporter | EAI98_03305 | Not Available | Positive | 780341 - 781747 | 51171.4 |
| cytidylate kinase-like family protein | EAI98_03310 | Not Available | Positive | 781757 - 782392 | 23183.6 |
| peptide chain release factor 2 | EAI98_03315 | Not Available | Positive | 782424 - 783536 | 42205.8 |
| duf1343 domain-containing protein | EAI98_03320 | Not Available | Positive | 783578 - 784915 | 48496.7 |
| hypothetical protein | EAI98_03325 | Not Available | Positive | 785204 - 788206 | 105571.0 |
| hypothetical protein | EAI98_03330 | Not Available | Positive | 788903 - 790984 | 72507.4 |
| hypothetical protein | EAI98_03335 | Not Available | Positive | 791191 - 792309 | 40884.8 |
| 4fe-4s dicluster domain-containing protein | EAI98_03340 | Not Available | Negative | 792386 - 792553 | 5587.69 |
| serine--trna ligase | EAI98_03345 | Not Available | Negative | 792606 - 793877 | 47534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
