Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | EAI98_03200 | Not Available | Negative | 748375 - 749736 | 49712.9 |
| two-component sensor histidine kinase | EAI98_03205 | Not Available | Negative | 749841 - 751898 | 78403.3 |
| atp-dependent clp protease atp-binding subunit | EAI98_03210 | Not Available | Negative | 752049 - 754502 | 91853.1 |
| hypothetical protein | EAI98_03215 | Not Available | Negative | 754688 - 755875 | 43328.2 |
| hypothetical protein | EAI98_03220 | Not Available | Positive | 756275 - 756967 | 25473.8 |
| metallophosphoesterase | EAI98_03225 | Not Available | Negative | 757061 - 757555 | 18317.1 |
| replication-associated recombination protein a | EAI98_03230 | Not Available | Negative | 757556 - 758830 | 47029.4 |
| aspartate--trna ligase | EAI98_03235 | Not Available | Negative | 758970 - 760727 | 66609.9 |
| nucleoside deaminase | EAI98_03240 | Not Available | Positive | 760873 - 761322 | 16146.4 |
| hypothetical protein | EAI98_03245 | Not Available | Positive | 761416 - 762375 | 34123.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
