Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| do family serine endopeptidase | EAI98_03150 | Not Available | Positive | 735389 - 736861 | 52448.8 |
| rna polymerase sigma factor rpod/siga | EAI98_03155 | Not Available | Positive | 736916 - 737776 | 32669.0 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | EAI98_03160 | Not Available | Negative | 737973 - 738866 | 31821.3 |
| uracil-dna glycosylase | EAI98_03165 | Not Available | Negative | 739067 - 739729 | 24701.5 |
| hypothetical protein | EAI98_03170 | Not Available | Positive | 740567 - 742006 | 51490.6 |
| tonb family protein | EAI98_03175 | Not Available | Negative | 742378 - 744564 | 79186.6 |
| blai/meci/copy family transcriptional regulator | EAI98_03180 | Not Available | Negative | 744600 - 744974 | 14276.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EAI98_03185 | Not Available | Negative | 745146 - 745895 | 29407.9 |
| hypothetical protein | EAI98_03190 | Not Available | Negative | 745901 - 746401 | 17931.6 |
| hypothetical protein | EAI98_03195 | Not Available | Negative | 746644 - 748323 | 62415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
