Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | EAI98_03040 | Not Available | Negative | 709924 - 712155 | 85138.3 |
| amidohydrolase | EAI98_03045 | Not Available | Negative | 712152 - 713264 | 40549.4 |
| 5,10-methylenetetrahydrofolate reductase | EAI98_03050 | Not Available | Negative | 713270 - 714235 | 35642.0 |
| methionine synthase | EAI98_03055 | Not Available | Negative | 714294 - 717905 | 131821.0 |
| glutaminyl-peptide cyclotransferase | EAI98_03060 | Not Available | Negative | 717906 - 718697 | 29048.4 |
| trigger factor | EAI98_03065 | Not Available | Positive | 719027 - 720352 | 50668.3 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EAI98_03070 | Not Available | Positive | 720579 - 721247 | 24310.4 |
| atp-dependent clp protease atp-binding subunit clpx | EAI98_03075 | Not Available | Positive | 721247 - 722524 | 47145.2 |
| transketolase | EAI98_03080 | Not Available | Positive | 722595 - 724628 | 73639.6 |
| duf4948 domain-containing protein | EAI98_03090 | Not Available | Negative | 724993 - 725574 | 22110.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
