Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EAI98_02495 | Not Available | Negative | 583119 - 583889 | 28444.4 |
| metal ion abc transporter substrate-binding protein | EAI98_02500 | Not Available | Negative | 583886 - 584791 | 33655.1 |
| cpbp family intramembrane metalloprotease | EAI98_02505 | Not Available | Negative | 584784 - 585578 | 29252.0 |
| paai family thioesterase | EAI98_02510 | Not Available | Positive | 585973 - 586467 | 19132.7 |
| helix-turn-helix domain-containing protein | EAI98_02515 | Not Available | Negative | 586717 - 587181 | 17112.5 |
| hit family protein | EAI98_02520 | Not Available | Negative | 587841 - 588227 | 14438.6 |
| hypothetical protein | EAI98_02525 | Not Available | Negative | 588687 - 589172 | 18119.0 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | EAI98_02530 | Not Available | Negative | 589174 - 591414 | 85050.5 |
| recombinase reca | EAI98_02535 | Not Available | Negative | 591421 - 592437 | 36667.4 |
| hypothetical protein | EAI98_02540 | Not Available | Negative | 592466 - 592945 | 18114.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
