Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | EAI98_02085 | Not Available | Positive | 494781 - 495011 | 8735.64 |
| xre family transcriptional regulator | EAI98_02090 | Not Available | Positive | 495042 - 495287 | 9722.71 |
| xre family transcriptional regulator | EAI98_02095 | Not Available | Positive | 495370 - 495609 | 9213.06 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | EAI98_02100 | Not Available | Negative | 495635 - 496258 | 23562.5 |
| sigma-70 family rna polymerase sigma factor | EAI98_02105 | Not Available | Negative | 496286 - 496849 | 22170.3 |
| glycosyltransferase | EAI98_02110 | Not Available | Negative | 496840 - 497994 | 44531.6 |
| trna guanosine(34) transglycosylase tgt | EAI98_02115 | Not Available | Positive | 498086 - 499216 | 42217.8 |
| yjgp/yjgq family permease | EAI98_02120 | Not Available | Positive | 499223 - 500326 | 42585.0 |
| aminofutalosine synthase mqne | EAI98_02125 | Not Available | Positive | 500328 - 501410 | 40883.9 |
| pasta domain-containing protein | EAI98_02130 | Not Available | Positive | 501468 - 502433 | 35720.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
