Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine transporter rhtb | EAI98_01985 | Not Available | Positive | 475599 - 476276 | 24758.0 |
| (d)cmp kinase | EAI98_01990 | Not Available | Positive | 476263 - 476961 | 26069.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EAI98_01995 | Not Available | Positive | 476983 - 477861 | 32109.6 |
| hypothetical protein | EAI98_02000 | Not Available | Positive | 477991 - 478461 | 17667.8 |
| s41 family peptidase | EAI98_02005 | Not Available | Positive | 478454 - 480118 | 61735.4 |
| sensor histidine kinase | EAI98_02010 | Not Available | Positive | 480129 - 481307 | 44859.4 |
| duf4271 domain-containing protein | EAI98_02015 | Not Available | Positive | 481304 - 482455 | 40246.0 |
| uroporphyrinogen-iii synthase | EAI98_02020 | Not Available | Positive | 482534 - 483352 | 30718.4 |
| ribonuclease p | EAI98_02025 | Not Available | Positive | 483360 - 483728 | 14293.4 |
| membrane protein insertion efficiency factor yidd | EAI98_02030 | Not Available | Positive | 483685 - 483945 | 9753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
