Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | EAI98_01885 | Not Available | Positive | 446927 - 448408 | 54023.0 |
| glycosyltransferase family 1 protein | EAI98_01890 | Not Available | Positive | 448413 - 449540 | 42632.5 |
| glycosyltransferase family 2 protein | EAI98_01895 | Not Available | Positive | 449537 - 450709 | 43739.3 |
| hybrid sensor histidine kinase/response regulator | EAI98_01900 | Not Available | Positive | 450768 - 451946 | 43557.5 |
| endonuclease | EAI98_01905 | Not Available | Negative | 452176 - 453222 | 39116.4 |
| sdr family oxidoreductase | EAI98_01910 | Not Available | Positive | 453319 - 454278 | 36138.6 |
| alpha/beta hydrolase | EAI98_01915 | Not Available | Negative | 454471 - 455457 | 35999.9 |
| gfo/idh/moca family oxidoreductase | EAI98_01920 | Not Available | Negative | 455565 - 456962 | 52187.3 |
| apolipoprotein n-acyltransferase | EAI98_01925 | Not Available | Positive | 457058 - 458644 | 59087.9 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | EAI98_01930 | Not Available | Positive | 458660 - 459949 | 47190.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
