Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation protein a | EAI98_01785 | Not Available | Negative | 422482 - 423951 | 52759.2 |
| Trna-thr | Not Available | Not Available | Positive | 424071 - 424146 | Not Available |
| cold shock domain-containing protein | EAI98_01795 | Not Available | Positive | 424485 - 424922 | 16256.2 |
| rna-binding protein | EAI98_01800 | Not Available | Positive | 424954 - 425280 | 11619.5 |
| efflux transporter outer membrane subunit | EAI98_01805 | Not Available | Negative | 425532 - 426908 | 51057.0 |
| multidrug efflux rnd transporter permease subunit | EAI98_01810 | Not Available | Negative | 426905 - 430000 | 112224.0 |
| efflux rnd transporter periplasmic adaptor subunit | EAI98_01815 | Not Available | Negative | 430004 - 431254 | 46015.5 |
| two-component sensor histidine kinase | EAI98_01820 | Not Available | Negative | 431627 - 433618 | 73850.3 |
| response regulator | EAI98_01825 | Not Available | Negative | 433630 - 434022 | 14938.0 |
| response regulator | EAI98_01830 | Not Available | Positive | 434375 - 434743 | 14384.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
