Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes finegoldii |
| Strain | strain aa_0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
743927 bp
Thymine Count
750301 bp
Guanine Count
1007870 bp
Cytosine Count
1000275 bp
Genome Length
3502373 bp
Protein-coding Genes
2978 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | EAI98_01435 | Not Available | Positive | 338086 - 338316 | 8815.47 |
| Trna-gly | Not Available | Not Available | Positive | 338487 - 338559 | Not Available |
| pyridoxal phosphate-dependent aminotransferase family protein | EAI98_01445 | Not Available | Negative | 338856 - 340127 | 46871.2 |
| dicarboxylate/amino acid:cation symporter | EAI98_01450 | Not Available | Negative | 340296 - 341453 | 40271.1 |
| hypothetical protein | EAI98_01455 | Not Available | Positive | 341810 - 342430 | 23827.7 |
| zinc ribbon domain-containing protein | EAI98_01460 | Not Available | Positive | 342442 - 342738 | 11069.8 |
| radical sam protein | EAI98_01465 | Not Available | Positive | 342795 - 343568 | 28641.3 |
| hypothetical protein | EAI98_01470 | Not Available | Positive | 343580 - 344419 | 31213.8 |
| yaaa family protein | EAI98_01475 | Not Available | Positive | 344426 - 345187 | 28873.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EAI98_01480 | Not Available | Negative | 345200 - 347098 | 68592.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
